Scientist at the Fred Hutch, studying viruses, evolution and immunity. Maintains @blab, @nextstrain and @seattleflu.
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Fred Hutchinson Cancer Research Center
- Seattle, WA
- bedford.io
- @trvrb
Highlights
- Pro
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dynamics-practical
dynamics-practical PublicInferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data
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nextstrain/auspice
nextstrain/auspice PublicWeb app for visualizing pathogen evolution
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nextstrain/augur
nextstrain/augur PublicPipeline components for real-time phylodynamic analysis
643 contributions in the last year
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Activity overview
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Contribution activity
March 2025
Created 24 commits in 5 repositories
Opened 4 pull requests in 4 repositories
matsen/ai-at-hhmi
1
open
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General proposal feedback
This contribution was made on Mar 19
nextstrain/nextstrain.org
1
merged
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Alphabetize manifest
This contribution was made on Mar 17
blab/blotter
1
merged
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Include phylo kernel blog post
This contribution was made on Mar 5
nextstrain/ncov-clades-schema
1
open
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Add clade 25A to the schema
This contribution was made on Mar 3
Reviewed 6 pull requests in 4 repositories
nextstrain/nextstrain.org
3 pull requests
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Alphabetize manifest
This contribution was made on Mar 17
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Rename "wnv/global" to "wnv/all-lineages"
This contribution was made on Mar 17
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Add A/H5N1 D1.1 build to featured analyses
This contribution was made on Mar 13
nextstrain/forecasts-ncov
1 pull request
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Include a location x variant count threshold for inclusion of GA
This contribution was made on Mar 20
nextstrain/measles
1 pull request
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Add
division
to allowed geo-resolutionsThis contribution was made on Mar 18
nextstrain/WNV
1 pull request
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Add lineage-1A and lineage-2 phylogenetic trees
This contribution was made on Mar 11
20
contributions
in private repositories
Mar 3 – Mar 21