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104 Open 280 Closed
104 Open 280 Closed
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Issues list

Domain prediction by structure search using Foldseek
#444 opened Mar 21, 2025 by xjhzjucas
pdb or mmcif ob AFDB50
#443 opened Mar 21, 2025 by HirokiK0
No GPU devices found when createdb using ProstT5
#442 opened Mar 20, 2025 by wyattxuanyang
2
Foldseek easy-cluster, easy-search
#439 opened Mar 17, 2025 by jmoojun
Segmentation Fault (Core Dumped) when Running foldseek makepaddedseqdb on AFDB50 Database
#436 opened Mar 8, 2025 by zxianren
2
Cannot open lookup file Error: target createdb died
#433 opened Feb 26, 2025 by fatima1492
6
Preparing my pdb100 database
#431 opened Feb 24, 2025 by kyle-davis279
How can I get the pdb or cif format of BFMD database?
#430 opened Feb 21, 2025 by yjyjyjy2016
1
foldseek-10 :: missing libcublasLt_static at link time ?
#429 opened Feb 20, 2025 by EricDeveaud
Discrepancy in Foldseek clustering results compared to AFDB clusters
#428 opened Feb 19, 2025 by YFeriel
1
webserver issues
#426 opened Feb 18, 2025 by martin-steinegger
No result for a reciprocal search of a very long protein
#422 opened Feb 10, 2025 by FlorianTrigodet
3
Possible issue with alntmscore
#416 opened Feb 3, 2025 by skrendaskrenduolis
Local easy-multimersearch does not replicate results from webserver
#414 opened Jan 24, 2025 by Dylan-Barcelos
FoldSeek Behavior with PolyGLY Backbone Structures
#412 opened Jan 20, 2025 by SarahKnapp1
7
Clustering performance issue: Foldseek exceeds expected runtime
#403 opened Dec 19, 2024 by YFeriel
2
foldseek result2msa a3m database contains unusable, non-significant alignments due to poor choice of cluster representative
#402 opened Dec 17, 2024 by shiraz-shah
foldseek result2msa on a clustering result creates an a3m database where cluster ids are inconsistent with createtsv output
#401 opened Dec 17, 2024 by shiraz-shah
foldseek createtsv on a clustering result outputs a tsv file where representatives are outliers, not centroids
#400 opened Dec 17, 2024 by shiraz-shah
2
Creating an tutorial video in japanese for Foldseek Search Server
#396 opened Dec 13, 2024 by yonesora56
1
Access to Multi-Domain Benchmark Dataset
#395 opened Dec 12, 2024 by nwod-edispu
Foldseek clustering stuck for days with errors
#390 opened Dec 2, 2024 by YFeriel
1
Behavior of --alt-ali in TM mode enhancement New feature or request
#388 opened Nov 28, 2024 by yonatan212
1
Getting BLAST-like e-value for TM-align?
#386 opened Nov 26, 2024 by meltzj
1
Expose increasing sensitivity search in FS
#379 opened Nov 2, 2024 by milot-mirdita
2
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