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@Imaging-Server-Kit Imaging Server Kit

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    21 repositories

    • serverkit-deploy-docker

      Public
      Reference deployment to run several image processing servers using Docker Compose
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-trackpy

      Public
      Implementation of a web server for object tracking using Trackpy.
      Python
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-trackastra

      Public
      Implementation of a web server for cell tracking using Trackastra.
      Python
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-stardist

      Public
      Implementation of a web server for cell nuclei detection using StarDist.
      Python
      •1•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-stable-diffusion

      Public
      Implementation of a web server for image generation using Stable Diffusion.
      Python
      •0•1•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-spotiflow

      Public
      Implementation of a web server for spot detection using Spotiflow.
      Python
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-spam

      Public
      Implementation of a web server for image registration using SPAM.
      Python
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-skimage-LoG

      Public
      Implementation of a web server for blob detection using Scikit-image's LoG detector
      Python
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-sam2

      Public
      Implementation of a web server for image segmentation using SAM 2.
      Python
      •0•1•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-resnet50

      Public
      Implementation of a web server for image classification using a ResNet50 model.
      Python
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-rembg

      Public
      Implementation of a web server for background subtraction using the Rembg library.
      Python
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-orientationpy

      Public
      Implementation of a web server for orientation filtering using Orientationpy.
      Python
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-n2v

      Public
      Implementation of a web server for image denoising using Noise2Void.
      Python
      •0•1•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-instanseg

      Public
      Implementation of a web server for cell nuclei detection using InstanSeg.
      Python
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-cellpose

      Public
      Implementation of a web server for cell nuclei detection using CellPose.
      Python
      •1•0•0•1•Updated Mar 28, 2025Mar 28, 2025

    • serverkit-blip-captioning

      Public
      Implementation of a web server for image captioning using BLIP.
      Python
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • imaging-server-kit

      Public
      Deploy image processing algorithms in FastAPI servers and easily run them in Napari, QuPath, and more.
      image-processingimage-analysisfastapi
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•0•0•Updated Mar 28, 2025Mar 28, 2025

    • .github

      Public
      0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • cookiecutter-serverkit

      Public
      Cookiecutter template for creating Imaging Server Kit servers
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • napari-serverkit

      Public
      Run image processing algorithms in Napari using a client/server interface
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated Feb 7, 2025Feb 7, 2025

    • qupath-extension-serverkit

      Public
      Run image processing algorithms in QuPath using a client/server interface
      Java
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Jan 15, 2025Jan 15, 2025