Correction of underreported Covid-19 case and death counts using a reference country based on Lachmann et al, 2020 medRxiv
pre-print, and via a multiplicative estimator for total deaths and cases. The estimator will be turned into a posterior prediction once data becomes available.
The app is hosted publicly at https://pharmhax.shinyapps.io/covid-corrector-shiny/.
Writeups available at NeuroSynergy, and Medium.
The analysis in this repository can be accessed using the R Shiny app in covid-corrector-shiny/app.R
, which can be ran from the terminal via R -e "shiny::runApp('covid-corrector-shiny/app.R')"
, or using RStudio.
Python code in the corrector.py
module mostly based on the Lachmann et al, 2020 medRxiv
pre-print. Please refer to examples.ipynb
to see how to use this module.