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covid19-corrector

Correction of underreported Covid-19 case and death counts using a reference country based on Lachmann et al, 2020 medRxiv pre-print, and via a multiplicative estimator for total deaths and cases. The estimator will be turned into a posterior prediction once data becomes available.

The app is hosted publicly at https://pharmhax.shinyapps.io/covid-corrector-shiny/.

Writeups available at NeuroSynergy, and Medium.

The analysis in this repository can be accessed using the R Shiny app in covid-corrector-shiny/app.R, which can be ran from the terminal via R -e "shiny::runApp('covid-corrector-shiny/app.R')", or using RStudio.

Python code in the corrector.py module mostly based on the Lachmann et al, 2020 medRxiv pre-print. Please refer to examples.ipynb to see how to use this module.

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correcting COVID-19 case and death report numbers

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