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@fraunhofer-izi

Fraunhofer IZI

Fraunhofer Institute for Cell Therapy and Immunology

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  1. Braun_et_al_2024 Braun_et_al_2024 Public

    R 5 1

  2. Rade_Grieb_et_al_2023 Rade_Grieb_et_al_2023 Public

    R 4

  3. geotag geotag Public

    A small utility to quickly tag studies and samples from the NCBI Gene Expression Omnibus (GEO) with a curses interface.

    Python 3 1

  4. gene_expression_deconvolution gene_expression_deconvolution Public

    Tools to allow the reconstruction of tumor cell specific gene expression patterns from bulk RNA-seq samples

    Jupyter Notebook 3 1

  5. multi_bary_plot multi_bary_plot Public

    Plot in generalized barycentric coordinates

    Python 1 1

  6. duplicates duplicates Public

    Utilities to find duplicated files and directories in large file systems.

    Shell 1 1

Repositories

Showing 10 of 14 repositories
  • Rade_et_al_CAR_2025 Public
    R 0 0 0 0 Updated Mar 18, 2025
  • Rade_Grieb_et_al_2023 Public
    R 4 0 0 0 Updated Feb 14, 2025
  • Braun_et_al_2024 Public
    R 5 1 0 0 Updated Jan 7, 2025
  • Grosse_et_al_2024 Public

    Code used to produce the results for the linked paper.

    0 0 0 0 Updated Nov 18, 2024
  • MultiQC Public Forked from MultiQC/MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    JavaScript 1 GPL-3.0 618 0 0 Updated Sep 25, 2024
  • Fandrei_et_al_2024 Public

    Supplementary code for the analysis of bridging with BsAb for BCMA CAR-T cell therapy in relapsed/refractory Multiple Myeloma.

    R 0 0 0 0 Updated Sep 20, 2024
  • 2024_Weber_et_al_ROR2_CAR_T Public
    R 0 GPL-3.0 0 0 0 Updated Mar 11, 2024
  • Rade_et_al_tcell_2023 Public
    R 1 GPL-3.0 0 0 0 Updated Nov 20, 2023
  • tumor_deconvolution Public

    Tools to infer the immune cell composition of tumor tissue from RNA-seq samples.

    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Dec 7, 2020
  • gene_expression_deconvolution Public

    Tools to allow the reconstruction of tumor cell specific gene expression patterns from bulk RNA-seq samples

    Jupyter Notebook 3 GPL-3.0 1 0 0 Updated Nov 23, 2020
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