Releases: bcgsc/pori_python
Release v1.0.0
Breaking Changes
- [KBDEV-1227] Signature variants support #42
- [DEVSU-2550, DEVSU-2477] Multivariant statements handling #45, #37
Improvements
- [KBDEV-1236] Added extra type checking for variant matching #25
- [DEVSU-2488] Move reformatting upstream get_cancer_predisposition_info() #41
- [DEVSU-2494] Add custom text to analysis summary #44, #46
- [SDEV-4409] Deprecate get_cancer_predisposition_info() & get_pharmacogenomic_info() #35
- Add image to test_upload contents #48
Bugfixes
- [KBDEV-1266] Fix redundand disease matching #47
- [SDEV-4605, SDEV-4601] Remove pattern check on chromosomeBand #43
- [DEVSU-2606], Combine chr with chromosomeBand #53
Release v0.1.2
Release v0.1.1
What's Changed
- SDEV-4431 - bugfix - content.spec.json not in distribution by @dustinbleile in #26
Release v0.1.0
Release/v0.1.0
First release of merged pori_ipr_python and pori_graphkb_python packages as pori_python.
Improvement:
merge pori_ipr_python and pori_graphkb_python adaptors
update test suite for use with external PORI deployments; skip tests that will only work on the BCGSC PORI deployment (where possible, replace with tests on other data)
DEVSU-2348: add function to fetch associated gene list per variant returned by cancer predisposition and pharmacogenomic gene variant functions
DEVSU-2349: add option to load reports by pori-ipr-api reports-async endpoint
SDEV-4409: update gene exclude lists
SDEV-4409: use typing extension > 4.4; remove max version on requests
KBDEV-1231: add test to ensure no incorrect matches to wildtype
Bugfix:
DEVSU-2348: fix test of pharmocogenomic gene list
SDEV-4409: use tqdm for progress bar
SDEV-4431: update mypy types