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Issues: HKU-BAL/Clair3

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10 Open 320 Closed
10 Open 320 Closed
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Issues list

Positions with reference calls (RefCall) are omitted when AF=1.000 (variant allele frequency = 0)
#374 opened Mar 20, 2025 by eduardoscopel
3
clair3 misses some variants
#373 opened Mar 20, 2025 by Rohit-Satyam
1
20bp insertion not detected
#372 opened Mar 14, 2025 by chrysas24
1
Inconsistent gVCF headers enhancement New feature or request
#371 opened Mar 10, 2025 by alexnater
3
GVCF output problem bug Something isn't working
#365 opened Feb 28, 2025 by jimmykhchiu
4
Favor Pileup over Full_alignment when SNP has high QUAL and Full alignment incorrectly assigns as Refcall enhancement New feature or request
#360 opened Feb 13, 2025 by wshropshire
@aquaskyline @zhengzhenxian
9
show more allele counts in INFO enhancement New feature or request
#320 opened Jul 12, 2024 by hoyonh
3
choose pileup call over full-alignment call if pileup call has 1) a way higher QUAL, 2) is an indel enhancement New feature or request
#318 opened Jul 2, 2024 by drtconway
6
Incorrect SNP representation when it overlaps a deletion enhancement New feature or request
#272 opened Feb 23, 2024 by ymcki
3
Send adjacent SNP and Indel candidates both to full-alignment model enhancement New feature or request
#260 opened Jan 10, 2024 by haraldgrove
9
ProTip! Updated in the last three days: updated:>2025-03-19.