DNACipher

Prediction of genomic measurements from DNA sequence in observed and unobserved cell types and assays

DNACipher is a DNA sequence deep learning model that also includes cell type and assay information on the model input.

Tutorial

Please see the google collab tutorial here:

https://colab.research.google.com/gist/BradBalderson/c4389baa0d789314259b8479cfd35747/dnacipher_inference_local.ipynb

To install and run locally, please see the tutorial here:

https://github.com/BradBalderson/DNACipher/blob/main/tutorials/DNACipher_inference_local.ipynb